Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAACCCAGCTTCCTCCACAGGGCAGG
(((((((((.((((.(((((.&))))).)))))))))...........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290003
GeneSymbolTHPO
Binding site929,960
Score0.846
Seed1
Au0.412
Energy-21.0
Binding len31
Me-5.916
Phylopstem1.4336173749999999
Phylopflank0.72558275
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure