Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAAGCCAGCCTTGAGATATGCAGCTGTGAG
((((((((((((((.((((((&.)))))).))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290033
GeneSymbolCOPG2
Binding site974,1006
Score0.885
Seed1
Au0.5
Energy-23.4
Binding len24
Me-4.673
Phylopstem3.030246866666667
Phylopflank4.398204625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure