Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCAGCTGTTGGGAGCAGGGTGCAGT
(((((.((((((((((.((((&)))).))))))))........)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290043
GeneSymbolTAP2
Binding site3940,3970
Score1.0
Seed0
Au0.456
Energy-21.2
Binding len30
Me-5.839
Phylopstem2.267819805555556
Phylopflank0.9724611624999999
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure