Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGGAGCTGCT
..((((((.((((((......&)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365197
GeneSymbolSMIM33
Binding site633,647
Score0.923
Seed1
Au0.441
Energy-20.9
Binding len14
Me-6.246
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end2
Position3UTR
2D Structure