Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAACAACTTAGCAGCTGCAGC
((((((((((((((((..(((&))).))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290048
GeneSymbolATL3
Binding site1340,1363
Score1.0
Seed1
Au0.529
Energy-25.7
Binding len23
Me-3.938
Phylopstem0.1434993722222222
Phylopflank-0.018990026249999972
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure