Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTAGGCGCCGGCCGCAGCTCGCAGG
(((((((((((((((......&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290048
GeneSymbolATL3
Binding site131,159
Score0.846
Seed1
Au0.235
Energy-24.8
Binding len18
Me-4.171
Phylopstem0.5087836250000001
Phylopflank0.3822078749999999
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure