Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTGCTACCAGTAGCTGCC
..(((((((((((.((((((.&)))..))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290049
GeneSymbolUSO1
Binding site1143,1165
Score0.808
Seed1
Au0.471
Energy-21.9
Binding len22
Me-5.814
Phylopstem5.0866247499999995
Phylopflank5.167530310000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure