Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCATCTGTAAATGCAC
.((((..(((((.((((((((&)))))))).)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290049
GeneSymbolUSO1
Binding site1303,1324
Score0.846
Seed0
Au0.559
Energy-19.4
Binding len21
Me-8.527
Phylopstem5.947714125
Phylopflank5.1932210075
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure