Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACCGCACCCATTTGCTGG
...(((((((((((((.((((&))))))))))))).......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290061
GeneSymbolSEMA3B
Binding site443,468
Score0.846
Seed0
Au0.397
Energy-23.3
Binding len25
Me-6.515
Phylopstem3.075327405
Phylopflank3.0221486424999995
Longest consecutive pairings13
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure