Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCATGGCCGCAGTGAGCT
..((.(((((((((((.((((&))))...)))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290075
GeneSymbolURGCP
Binding site2670,2693
Score0.923
Seed0
Au0.426
Energy-21.9
Binding len23
Me-9.076
Phylopstem2.888934649090909
Phylopflank2.1961661552500003
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure