Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTGCCAGGG
.(((((((..(...........&)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001290079
GeneSymbolNKX1-1
Binding site675,686
Score0.846
Seed1
Au0.162
Energy-16.5
Binding len11
Me-12.553
Phylopstem-0.05387407142857143
Phylopflank-0.12271125625000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure