Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTGTGCGCCGCGCAGCTGCC
..((((((((((.((((((((&))))....)))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290079
GeneSymbolNKX1-1
Binding site1234,1259
Score0.846
Seed1
Au0.221
Energy-23.7
Binding len25
Me-6.246
Phylopstem0.7591957272727273
Phylopflank0.28965311875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure