Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCATGCAGCATGTAAA
((((((((((((((((..(((&)))))))).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290096
GeneSymbolTMPRSS4
Binding site5392,5414
Score0.846
Seed1
Au0.589
Energy-20.8
Binding len22
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure