Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCTGAACCCAGCTGTAGA
(((((((((.((((....(((&)))....))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290118
GeneSymbolTIMM23B
Binding site557,578
Score0.923
Seed1
Au0.471
Energy-19.4
Binding len21
Me-6.149
Phylopstem0.16526055555555555
Phylopflank1.19098122125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure