Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCAGCCTGGAGGCTGGGCTGCAAC
((((((((.(((((...((((&.))))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290185
GeneSymbolVPS11
Binding site2984,3012
Score0.846
Seed1
Au0.338
Energy-22.5
Binding len22
Me-5.962
Phylopstem4.193792625
Phylopflank3.1462887562500006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure