Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTGGACAACGCTGGCTGCAAT
((((((((((.(((((..((.&))..))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290214
GeneSymbolCTBP2
Binding site4408,4429
Score0.923
Seed1
Au0.471
Energy-21.3
Binding len21
Me-6.762
Phylopstem4.348579090909091
Phylopflank3.9117423124999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure