Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAATGGCAGCAAGATTAAGAAAATTGTGCAT
.(((((((((.(((((..(((&)))))))).)))))................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290224
GeneSymbolTPTE
Binding site269,304
Score0.846
Seed1
Au0.647
Energy-18.6
Binding len35
Me-6.618
Phylopstem0.13000549999999994
Phylopflank0.5414157875000001
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end6
Position5UTR
2D Structure