Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTCAGCATTAGAAATGTTTAGCTTTGTATGAACTGAGTGTGCCAGA
..(((((((((...((......&.))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001290232
GeneSymbolCDIN1
Binding site1719,1768
Score0.846
Seed1
Au0.676
Energy-16.3
Binding len16
Me-10.45
Phylopstem1.0712443333333332
Phylopflank0.46109437912499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure