Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCTGCCGGTCAGCTGCT
..(((((((((((.((.((((&)))).)).))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290268
GeneSymbolRIPOR3
Binding site3651,3673
Score0.846
Seed1
Au0.368
Energy-24.6
Binding len22
Me-5.814
Phylopstem2.0993459230769234
Phylopflank3.1536489184999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure