Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAAGCTGCAGCTGGAGG
((.(((((((((((....(((&)))....))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290268
GeneSymbolRIPOR3
Binding site1338,1360
Score1.0
Seed0
Au0.456
Energy-23.0
Binding len22
Me-6.464
Phylopstem2.410206590909091
Phylopflank2.0106051575
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure