Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGCCTCAGCTGCT
..(((((((.(((....((((&))))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290294
GeneSymbolSORBS1
Binding site5695,5713
Score0.923
Seed1
Au0.559
Energy-22.5
Binding len18
Me-8.025
Phylopstem2.2984642857142856
Phylopflank4.25105160875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure