Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTGCATATGATGCCAGC
..(((((((.((((((((((..&)))))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001290296
GeneSymbolSORBS1
Binding site5396,5415
Score0.846
Seed1
Au0.618
Energy-17.8
Binding len19
Me-6.2
Phylopstem3.96135
Phylopflank3.3306893300000007
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure