Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTAATAACTGCAGTGTTTCCCGCCTTGGGCTTGCAGC
((((((((((((((((.(((.&))).))))))))))).................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290312
GeneSymbolCTNNA1
Binding site2873,2911
Score0.923
Seed1
Au0.559
Energy-18.5
Binding len38
Me-3.938
Phylopstem1.7150647545454547
Phylopflank1.1032607875000002
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end6
Position3UTR
2D Structure