Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTATGACTGCAGTGAATGTGGA
(((((((((((((((((((((&))))))))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290318
GeneSymbolZNF304
Binding site1533,1558
Score0.923
Seed1
Au0.529
Energy-21.7
Binding len25
Me-3.938
Phylopstem0.08710445833333334
Phylopflank-0.2970551875
Longest consecutive pairings16
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure