Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAATGAAAAAGAAAGCTGTGAT
((((((((...((((((((((&)))))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001290321
GeneSymbolDMXL1
Binding site5410,5438
Score1.0
Seed1
Au0.676
Energy-20.0
Binding len28
Me-9.061
Phylopstem5.230741200000001
Phylopflank4.7488448
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure