Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGAGCAAGAGCTGTG
..((((((...(((.((((((&)))))).)))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018361
GeneSymbolAGPAT5
Binding site2415,2435
Score0.846
Seed1
Au0.574
Energy-20.9
Binding len20
Me-10.816
Phylopstem2.0933055
Phylopflank1.2562713437500004
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure