Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGAAATCTTATTTTAGTATAGCTACAGCTGCAGT
(((((((((.(((((((....&.))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018362
GeneSymbolLIN7C
Binding site2423,2462
Score1.0
Seed1
Au0.691
Energy-21.9
Binding len19
Me-5.18
Phylopstem-0.7812491111111111
Phylopflank-0.374669499
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure