Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTATGGAAGGAGCTGCAAA
((((((((.(..((((((((.&))))))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018367
GeneSymbolACER3
Binding site4668,4689
Score0.846
Seed1
Au0.721
Energy-19.9
Binding len21
Me-11.166
Phylopstem-0.2724456625
Phylopflank-0.06487804875
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure