Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAACCACAGCTGCT
..(((((((.((((....(((&)))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018369
GeneSymbolDEPDC1B
Binding site1584,1602
Score0.846
Seed1
Au0.544
Energy-22.2
Binding len18
Me-7.168
Phylopstem4.296410285714286
Phylopflank2.086502545
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure