Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAACAGCAGCTGG
...(((((((.(((.(((((.&))))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018371
GeneSymbolCSGALNACT1
Binding site1884,1902
Score0.949
Seed0
Au0.5
Energy-23.7
Binding len18
Me-10.075
Phylopstem4.739053
Phylopflank5.2001070999999985
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure