Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCCTGCAAAAGTAACCCAGTTGCAC
.((((((((.(((((((((((&)))))))..........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018371
GeneSymbolCSGALNACT1
Binding site2451,2481
Score0.923
Seed1
Au0.529
Energy-20.6
Binding len30
Me-5.036
Phylopstem3.088801
Phylopflank3.4509744275000003
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure