Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATTGTGTTCTATGCCAGGG
.((((((((((((((.......&)))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018373
GeneSymbolSYNJ2BP
Binding site3883,3903
Score0.846
Seed1
Au0.662
Energy-17.3
Binding len20
Me-4.026
Phylopstem0.1112483152631579
Phylopflank-0.047752213000000016
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure