Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGGTGTGCAGCCGCAGTTGA
...((((((((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018373
GeneSymbolSYNJ2BP
Binding site4734,4756
Score0.846
Seed0
Au0.632
Energy-24.7
Binding len16
Me-6.515
Phylopstem-0.2146579142857143
Phylopflank0.0586628255
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure