Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACTAGGGTGGCAACTGAAGTTGTAGT
((((((((.(((((((.....&.))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018376
GeneSymbolNIPSNAP3B
Binding site5055,5086
Score0.846
Seed1
Au0.544
Energy-18.0
Binding len18
Me-4.994
Phylopstem0.016412157499999996
Phylopflank0.21180229725000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure