Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGCAGAAGGTGGGAGTGGCTCCCCAGAAACGCAGCTGCAGG
(((((((((((..(.(..((.&.))..).)..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018379
GeneSymbolMINDY1
Binding site2101,2148
Score0.923
Seed1
Au0.412
Energy-22.7
Binding len22
Me-9.309
Phylopstem-0.45572405454545445
Phylopflank0.3191919625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure