Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACGGACAACTGCAGCCTGAAAGACCTGGTGCGGG
((((((((((((((((..(((&)).)..))))))))))).............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018384
GeneSymbolGIMAP5
Binding site796,832
Score0.846
Seed1
Au0.456
Energy-20.9
Binding len36
Me-3.938
Phylopstem0.8962358551724136
Phylopflank-0.4567373550000002
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure