Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCAGCCCTGCAGCCTGCC
..(((((((((((((...(((&)))..)))))..))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018384
GeneSymbolGIMAP5
Binding site1663,1685
Score0.846
Seed1
Au0.368
Energy-19.9
Binding len22
Me-5.19
Phylopstem-0.13559953750000003
Phylopflank-0.07166314624999999
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure