Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCATTGTGCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGA
.((.((((((((((((((((..&))))))))))))............................))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018385
GeneSymbolLSG1
Binding site2029,2079
Score0.846
Seed0
Au0.471
Energy-17.9
Binding len50
Me-6.825
Phylopstem5.287923000000002
Phylopflank4.1573130825
Longest consecutive pairings12
Position of longest consecutive pairings38
Pairings in 3prime end6
Position3UTR
2D Structure