Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACTTCCGTCGGCTGTGAA
((((((((((((..((.(((.&))).))..))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018390
GeneSymbolPLCXD1
Binding site5215,5237
Score0.846
Seed1
Au0.456
Energy-23.0
Binding len22
Me-6.084
Phylopstem-1.0019847230769228
Phylopflank-0.5650482050000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure