Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACTACCATCGGGGAGAAGGTGTGCCTGGAGGTGAGCAGCTGCC
..((((((((.......((((&.))))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018393
GeneSymbolTCP11L1
Binding site1420,1467
Score1.0
Seed1
Au0.353
Energy-20.7
Binding len22
Me-14.243
Phylopstem3.884593
Phylopflank2.4954193212499995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure