Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGGCGCCCGCGGCTGGGAC
((.(((((((((.(((..(((&)))...))).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018397
GeneSymbolCHDH
Binding site921,944
Score0.846
Seed0
Au0.279
Energy-24.0
Binding len23
Me-6.784
Phylopstem5.4738603333333335
Phylopflank5.780651849999998
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure