Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCACCCTGTGGCTGTAGA
((((((((((((.((((.(((&))).)))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018397
GeneSymbolCHDH
Binding site3505,3528
Score0.846
Seed1
Au0.574
Energy-22.6
Binding len23
Me-5.227
Phylopstem3.1238413846153845
Phylopflank3.517896887500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure