Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTGACTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018400
GeneSymbolSCN3B
Binding site2654,2677
Score0.846
Seed1
Au0.559
Energy-18.0
Binding len16
Me-8.406
Phylopstem-0.35825
Phylopflank0.002799453749999979
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure