Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCACAGCCTGGCTGCT
..(((((((.((((((((((.&))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018400
GeneSymbolSCN3B
Binding site415,435
Score0.923
Seed1
Au0.382
Energy-22.0
Binding len20
Me-6.2
Phylopstem0.10643966666666664
Phylopflank-0.1908686225
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure