Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGGCCGCTACTGCGAG
((((((..(((((((.(((((&))))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018406
GeneSymbolMUC4
Binding site15307,15328
Score0.846
Seed0
Au0.324
Energy-26.3
Binding len21
Me-8.028
Phylopstem1.307142857142857
Phylopflank0.62248337125
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure