Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACACTGCAGCTGCT
..((((((((((.(((.(((.&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018406
GeneSymbolMUC4
Binding site47,65
Score0.846
Seed1
Au0.294
Energy-26.0
Binding len18
Me-6.246
Phylopstem-0.02500395999999998
Phylopflank-0.83497660125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure