Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATCCATAGGCGCAGGTGCAC
.((((.(((((.(((((((((&)))))))....)).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018406
GeneSymbolMUC4
Binding site16506,16531
Score1.0
Seed0
Au0.515
Energy-23.2
Binding len25
Me-9.041
Phylopstem0.8163307615384614
Phylopflank0.45449890881578975
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure