Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGCACCTGCAGTGCC
..(((.(((((((..((((((&))))))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018410
GeneSymbolHJURP
Binding site428,448
Score0.923
Seed0
Au0.544
Energy-20.9
Binding len20
Me-8.45
Phylopstem-0.020233374999999998
Phylopflank-0.10859592624999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure