Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAGCCACAGCGCC
..((.((((.((((((.(((.&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018410
GeneSymbolHJURP
Binding site3007,3024
Score0.846
Seed0
Au0.426
Energy-20.9
Binding len17
Me-10.319
Phylopstem0.32173416666666665
Phylopflank1.0038385292499998
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure