Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTTCTGCCAGTCTGTAT
.(((((((((((..((((((.&))))))..)))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018416
GeneSymbolFOXJ2
Binding site3444,3466
Score1.0
Seed1
Au0.588
Energy-21.8
Binding len22
Me-5.939
Phylopstem0.1634931
Phylopflank0.4541796937500001
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure